Question Video: Understanding the Action of Restriction Enzymes | Nagwa Question Video: Understanding the Action of Restriction Enzymes | Nagwa

Question Video: Understanding the Action of Restriction Enzymes Biology • Third Year of Secondary School

Samples of DNA are taken from two organisms and mixed with restriction enzyme Bam HI. The restriction enzyme cuts the DNA from organism A into three sections but cuts the DNA from organism B into only two. What does this suggest about the DNA of the organisms? [A] Organism A has fewer Bam HI recognition sequences in their DNA than organism B. [B] Organism A has more Bam HI recognition sequences in their DNA than organism B. [C] The DNA of organism B is longer than that of organism A. [D] The sample taken from organism B was not mixed with enough restriction enzymes.

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Video Transcript

Samples of DNA are taken from two organisms and mixed with restriction enzyme Bam HI. The restriction enzyme cuts the DNA from organism A into three sections but cuts the DNA from organism B into only two. What does this suggest about the DNA of the organisms? Organism A has fewer Bam HI recognition sequences in their DNA than organism B. Organism A has more Bam HI recognition sequences in their DNA than organism B. The DNA of organism B is longer than that of organism A. Or the sample taken from organism B was not mixed with enough restriction enzymes.

This question is asking us about restriction enzymes and how they can cut DNA differently between two organisms. There’s a few key terms in this question that we’ll need to address. So, let’s clear the answer choices so we have more room to work with. A restriction enzyme is a special type of enzyme. You’ll recall that an enzyme is a protein that acts as a biological catalyst. What this means is it can make a chemical reaction go much more quickly. It can do this by binding to its specific substrate and then create conditions for a chemical reaction to occur much more rapidly, like the cleavage of the substrate into two fragments as shown here.

Restriction enzymes are enzymes that catalyze the cleavage of DNA. Restriction enzymes are kind of like molecular scissors, and they can cut DNA, their substrate, at specific DNA sequences that they recognize. These specific DNA sequences are called recognition sequences, and each restriction enzyme has a unique recognition sequence that it binds to and cleaves.

The restriction enzyme Bam HI in this question has a recognition sequence of GGATCC. So, if the restriction enzyme that cut this DNA was Bam HI, then these two cuts would correspond to this sequence. In other words, this DNA has two Bam HI recognition sequences. After the DNA is cut, it will produce fragments or sections of DNA. So, in this example where there are two BAM HI recognition sequences in this linear DNA substrate, there are three sections that are formed.

Now, let’s look at the question again. The question states that Bam HI cuts the DNA from organism A into three sections but cuts the DNA from organism B into only two. Now, let’s assume the DNA is linear and work this out. Organism A is cut with Bam HI and produces three fragments. This implies that there must have been two recognition sequences for Bam HI, whereas in organism B, there’s only two fragments that are produced. This implies that there was only one Bam HI recognition sequence. So, when the DNA is linear, this suggests that there are more recognition sequences in organism A compared to organism B.

But what if the DNA is circular? Bacteria generally have circular DNA. So, let’s look at this situation before choosing an answer. Here is organism A being cut into three sections. In order to produce this fragment, the circular DNA would have to be cut here and here. And in order to produce the remaining two fragments, we would need an additional cut here. So, that’s a total of three recognition sequences for Bam HI in organism A. Here’s the two fragments produced in organism B. And in order to produce these fragments, we would need two cuts, one here and one here. So, organism B only has two Bam HI recognition sequences.

So, when the DNA is circular, organism A has more recognition sequences than organism B. This is the same result that we found with linear DNA. Therefore, the correct answer is that organism A has more Bam HI recognition sequences in their DNA than organism B.

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